Proteins	Positions within proteins	Leading proteins	Protein	Fasta headers	Localization prob	Score diff	PEP	Score	Delta score	Score for localization	Diagnostic peak	Number of Met->aha(tagMCL)	Amino acid	Sequence window	Modification window	Peptide window coverage	Met->aha(tagMCL) Probabilities	Met->aha(tagMCL) Score diffs	Position in peptide	Charge	Mass error [ppm]	Ratio M/L	Ratio M/L___1	Ratio M/L___2	Ratio M/L___3	Ratio M/L normalized	Ratio M/L normalized___1	Ratio M/L normalized___2	Ratio M/L normalized___3	Ratio M/L unmod. pep.	Ratio M/L localized	Ratio M/L nmods	Ratio M/L variability [%]	Ratio M/L count	Ratio M/L iso-count	Ratio M/L type	Ratio H/L	Ratio H/L___1	Ratio H/L___2	Ratio H/L___3	Ratio H/L normalized	Ratio H/L normalized___1	Ratio H/L normalized___2	Ratio H/L normalized___3	Ratio H/L unmod. pep.	Ratio H/L localized	Ratio H/L nmods	Ratio H/L variability [%]	Ratio H/L type	Ratio H/L count	Ratio H/L iso-count	Ratio H/M	Ratio H/M___1	Ratio H/M___2	Ratio H/M___3	Ratio H/M normalized	Ratio H/M normalized___1	Ratio H/M normalized___2	Ratio H/M normalized___3	Ratio H/M unmod. pep.	Ratio H/M localized	Ratio H/M nmods	Ratio H/M variability [%]	Ratio H/M count	Ratio H/M iso-count	Ratio H/M type	Occupancy L	Occupancy M	Occupancy H	Intensity	Intensity L	Intensity M	Intensity H	Ratio mod/base L	Ratio mod/base M	Ratio mod/base H	Reverse	Potential contaminant	id	Protein group IDs	Positions	Position	Peptide IDs	Mod. peptide IDs	Evidence IDs	MS/MS IDs	Best localization evidence ID	Best localization MS/MS ID	Best localization raw file	Best localization scan number	Best score evidence ID	Best score MS/MS ID	Best score raw file	Best score scan number	Best PEP evidence ID	Best PEP MS/MS ID	Best PEP raw file	Best PEP scan number
sp|Q63HK5|TSH3_HUMAN	419	sp|Q63HK5|TSH3_HUMAN	sp|Q63HK5|TSH3_HUMAN	>sp|Q63HK5|TSH3_HUMAN Teashirt homolog 3 OS=Homo sapiens GN=TSHZ3 PE=1 SV=2	1	46.6634	0.052271	46.663	13.39	46.663		1	M	HMMVTGHFIKVTNSAMKKGKPIVETPVTPTI	X;X;X;X;X;X;X;X;X;X;X;X;X;X;X;Met->aha(tagMCL);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXPPPPPPPXXXXXXXXXXXXXX	VTNSAM(1)K	VTNSAM(46.66)K	6	3	8.4263	0.95969	0.95969	NaN	NaN	1.9596	1.9596	NaN	NaN	NaN	+	1	450.54	2	2	Median	1.1577	1.1577	NaN	NaN	2.1966	2.1966	NaN	NaN	NaN	+	1	497.42	Median	2	2	1.2063	1.2063	NaN	NaN	1.4442	1.4442	NaN	NaN	NaN	+	1	46.876	2	2	Median	NaN	NaN	NaN	83293	45097	12957	25239	NaN	NaN	NaN			0	188	419	419	1427	1513	6161;6162	23316;23317	6162	23317	SET1- 1A- NON LINEAR-2	120830	6162	23317	SET1- 1A- NON LINEAR-2	120830	6162	23317	SET1- 1A- NON LINEAR-2	120830
tr|A8MYC1|A8MYC1_HUMAN	12	tr|A8MYC1|A8MYC1_HUMAN	tr|A8MYC1|A8MYC1_HUMAN	>tr|A8MYC1|A8MYC1_HUMAN Ribonuclease P protein subunit p29 OS=Homo sapiens GN=POP4 PE=2 SV=2	0.984091	17.9139	0.0160021	53.163	34.842	53.163		1	M	____MHCIRKRRMTPMSRYSIFIPIHEIWKQ	X;X;X;X;X;X;X;X;X;X;X;X;Oxidation (M);X;X;Met->aha(tagMCL);X;X;X;X;X;X;X;X;X;X;X;X;X;X;X	XXXXXXXXXXXPPPPPPPXXXXXXXXXXXXX	RM(0.016)TPM(0.984)SR	RM(-17.91)TPM(17.91)SR	5	3	7.0706																																														NaN	NaN	NaN	0	0	0	0	NaN	NaN	NaN			1	231	12	12	1073	1139	4508	17726	4508	17726	SET1- 1A- NON LINEAR-2	167850	4508	17726	SET1- 1A- NON LINEAR-2	167850	4508	17726	SET1- 1A- NON LINEAR-2	167850
